Browsing M.Sc. Computer Science by Title
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Improving Short DNA Sequence Alignment with Parallel Computing
(20130411)Variations in different types of genomes have been found to be responsible for a large degree of physical diversity such as appearance and susceptibility to disease. Identification of genomic variations is difficult and ... 
Improving the Scalability of Reduct Determination in Rough Sets
(20130409)Rough Set Data Analysis (RSDA) is a noninvasive data analysis approach that solely relies on the data to find patterns and decision rules. Despite its noninvasive approach and ability to generate human readable rules, ... 
An Interactive Theorem Prover for FirstOrder Dynamic Logic
(Brock University, 20121011)Dynamic logic is an extension of modal logic originally intended for reasoning about computer programs. The method of proving correctness of properties of a computer program using the wellknown Hoare Logic can be ... 
Inverse Illumination Design with Genetic Programming
Interior illumination is a complex problem involving numerous interacting factors. This research applies genetic programming towards problems in illumination design. The Radiance system is used for performing accurate ... 
LFuzzy Relations in Coq
(Brock University, 20140905)Heyting categories, a variant of Dedekind categories, and Arrow categories provide a convenient framework for expressing and reasoning about fuzzy relations and programs based on those methods. In this thesis we present ... 
LFuzzy Structured Query Language
Lattice valued fuzziness is more general than crispness or fuzziness based on the unit interval. In this work, we present a query language for a lattice based fuzzy database. We define a Lattice Fuzzy Structured Query ... 
Modeling Metal Protein Complexes from Experimental Extended Xray Absorption Fine Structure using Computational Intelligence
(Brock University, 20141030)Experimental Extended Xray Absorption Fine Structure (EXAFS) spectra carry information about the chemical structure of metal protein complexes. However, pre dicting the structure of such complexes from EXAFS spectra ... 
A MultiObjective Genetic Algorithm with Side Effect Machines for Motif Discovery
(Brock University, 20120918)Understanding the machinery of gene regulation to control gene expression has been one of the main focuses of bioinformaticians for years. We use a multiobjective genetic algorithm to evolve a specialized version of ... 
MultiObjective Genetic Algorithms for the Single Allocation Hub Location Problem
(Brock University, 20130912)Hub Location Problems play vital economic roles in transportation and telecommunication networks where goods or people must be efficiently transferred from an origin to a destination point whilst direct origindestination ... 
Network Similarity Measures and Automatic Construction of Graph Models using Genetic Programming
(Brock University, 20140905)A complex network is an abstract representation of an intricate system of interrelated elements where the patterns of connection hold significant meaning. One particular complex network is a social network whereby the ... 
New Contig Creation Algorithm for the de novo DNA Assembly Problem
(Brock University, 20140225)DNA assembly is among the most fundamental and difficult problems in bioinformatics. Near optimal assembly solutions are available for bacterial and small genomes, however assembling large and complex genomes especially the ... 
ObjectOriented Genetic Programming for the Automatic Inference of Graph Models for Complex Networks
Complex networks are systems of entities that are interconnected through meaningful relationships. The result of the relations between entities forms a structure that has a statistical complexity that is not formed by ... 
Particle swarm optimization for twoconnected networks with bounded rings
(Brock University, 20090128)The TwoConnected Network with Bounded Ring (2CNBR) problem is a network design problem addressing the connection of servers to create a survivable network with limited redirections in the event of failures. Particle ... 
Passive Solar Building Design Using Genetic Programming
(Brock University, 20131028)Passive solar building design is the process of designing a building while considering sunlight exposure for receiving heat in winter and rejecting heat in summer. The main goal of a passive solar building design is to ... 
Properties and algorithms of the (n, k)arrangement graphs
(Brock University, 20100309)The (n, k)arrangement interconnection topology was first introduced in 1992. The (n, k )arrangement graph is a class of generalized star graphs. Compared with the well known nstar, the (n, k )arrangement graph is ... 
Properties and algorithms of the (n, k)star graphs
(Brock University, 20090128)The (n, k)star interconnection network was proposed in 1995 as an attractive alternative to the nstar topology in parallel computation. The (n, k )star has significant advantages over the nstar which itself was ... 
Properties and algorithms of the hyperstar graph and its related graphs
(Brock University, 20100309)The hyperstar interconnection network was proposed in 2002 to overcome the drawbacks of the hypercube and its variations concerning the network cost, which is defined by the product of the degree and the diameter. Some ... 
Properties and Algorithms of the KCube Graphs
(Brock University, 20140324)The KCube interconnection topology was rst introduced in 2010. The KCube graph is a compound graph of a Kautz digraph and hypercubes. Compared with the at tractive Kautz digraph and well known hypercube graph, the KCube ... 
Properties and Algorithms of the KCube Interconnection Networks
The KCube interconnection network was first introduced in 2010 in order to exploit the good characteristics of two wellknown interconnection networks, the hypercube and the Kautz graph. KCube links up multiple processors ... 
Quadtree representation and compression of spatial data
(Brock University, 20100309)Spatial data representation and compression has become a focus issue in computer graphics and image processing applications. Quadtrees, as one of hierarchical data structures, basing on the principle of recursive ...